Publications

Correction: Practical considerations for measuring the effective reproductive number, Rt.

Author(s): Gostic KM, McGough L, Baskerville EB, Abbott S, Joshi K, Tedijanto C, Kahn R, Niehus R, Hay JA, De Salazar PM, Hellewell J, Meakin S, Munday JD, Bosse NI, Sherrat K, Thompson RN, White LF, Huisman JS, Scire J, Bonhoeffer S, Stadler T, Wallinga J, Funk S, Lipsitch M, Cobey S|Journal: PLoS Comput Biol|PMID: 34879070| December 2021

[This corrects the article DOI: 10.1371/journal.pcbi.1008409.].

Antibiotic use and presumptive pathogens in the Veterans Affairs Healthcare System.

Author(s): Tedijanto C, Nevers M, Samore MH, Lipsitch M|Journal: Clin Infect Dis|PMID: 33621326| February 2021

Empirical antibiotic use is common in the hospital. Here, we characterize patterns of antibiotic use, infectious diagnoses, and microbiological lab…

Practical considerations for measuring the effective reproductive number, Rt.

Author(s): Gostic KM, McGough L, Baskerville EB, Abbott S, Joshi K, Tedijanto C, Kahn R, Niehus R, Hay JA, De Salazar PM, Hellewell J, Meakin S, Munday JD, Bosse NI, Sherrat K, Thompson RN, White LF, Huisman JS, Scire J, Bonhoeffer S, Stadler T, Wallinga J, Funk S, Lipsitch M, Cobey S|Journal: PLoS Comput Biol|PMID: 33301457| December 2020

Estimation of the effective reproductive number Rt is important for detecting changes in disease transmission over time. During the Coronavirus…

Projecting the transmission dynamics of SARS-CoV-2 through the postpandemic period.

Author(s): Kissler SM, Tedijanto C, Goldstein E, Grad YH, Lipsitch M|Journal: Science|PMID: 32291278| May 2020

It is urgent to understand the future of severe acute respiratory syndrome-coronavirus 2 (SARS-CoV-2) transmission. We used estimates of seasonality,…

Potential impact of outpatient stewardship interventions on antibiotic exposures of common bacterial pathogens.

Author(s): Tedijanto C, Grad YH, Lipsitch M|Journal: Elife|PMID: 32022685| February 2020

The relationship between antibiotic stewardship and population levels of antibiotic resistance remains unclear. In order to better understand shifts in…

Resistance diagnostics as a public health tool to combat antibiotic resistance: A model-based evaluation.

Author(s): McAdams D, Wollein Waldetoft K, Tedijanto C, Lipsitch M, Brown SP|Journal: PLoS Biol|PMID: 31095567| June 2019

Rapid point-of-care resistance diagnostics (POC-RD) are a key tool in the fight against antibiotic resistance. By tailoring drug choice to…

Accounting for unobserved and differential susceptible time at risk in retrospective studies: response to Dean (2019).

Author(s): Lewnard JA, Tedijanto C, Cowling BJ, Lipsitch M|Journal: Am J Epidemiol|PMID: 30689694| February 2019

Estimating the proportion of bystander selection for antibiotic resistance among potentially pathogenic bacterial flora.

Author(s): Tedijanto C, Olesen SW, Grad YH, Lipsitch M|Journal: Proc Natl Acad Sci U S A|PMID: 30559213| December 2018

Bystander selection-the selective pressure for resistance exerted by antibiotics on microbes that are not the target pathogen of treatment-is critical…

Measurement of Vaccine Direct Effects Under the Test-Negative Design.

Author(s): Lewnard JA, Tedijanto C, Cowling BJ, Lipsitch M|Journal: Am J Epidemiol|PMID: 30099505| December 2018

Test-negative designs are commonplace in assessments of influenza vaccination effectiveness, estimating this value from the exposure odds ratio of vaccination…