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Publications

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Beyond consensus sequence: a quantitative scheme for inferring transmission using deep sequencing in a bacterial transmission model

Author(s): Senghore M, Read H, Oza P, Johnson S, Passarelli-Araujo H, Taylor BP, Ashley S, Grey A, Callendrello A, Lee R, Goddard MR, Lumley T, Hanage WP, Wiles S|Journal: bioRxiv| October 2022
Genomic surveillance provides a data source complementary to contact tracing to resolve putative transmission chains. However, the role of within-host…
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