Resolving drug selection and migration in an inbred South American Plasmodium falciparum population with identity-by-descent analysis.

Author(s): Carrasquilla M, Early AM, Taylor AR, Knudson Ospina A, Echeverry DF, Anderson TJC, Mancilla E, Aponte S, Cárdenas P, Buckee CO, Rayner JC, Sáenz FE, Neafsey DE, Corredor VJournal: PLoS PathogPMID: 36542676 December 2022
The human malaria parasite Plasmodium falciparum is globally widespread, but its prevalence varies significantly between and even within countries. Most…

Measurably recombining malaria parasites.

Author(s): Camponovo F, Buckee CO, Taylor ARJournal: Trends ParasitolPMID: 36435688 November 2022
Genomic epidemiology has guided research and policy for various viral pathogens and there has been a parallel effort towards using…

Design and implementation of multiplexed amplicon sequencing panels to serve genomic epidemiology of infectious disease: a malaria case study.

Author(s): LaVerriere E, Schwabl P, Carrasquilla M, Taylor AR, Johnson ZM, Shieh M, Panchal R, Straub TJ, Kuzma R, Watson S, Buckee CO, Andrade CM, Portugal S, Crompton PD, Traore B, Rayner JC, Corredor V, James K, Cox H, Early AM, MacInnis BL, Neafsey DEJournal: Mol Ecol ResourPMID: 35437908 April 2022
Multiplexed PCR amplicon sequencing (AmpSeq) is an increasingly popular application for cost-effective monitoring of threatened species and managed wildlife populations,…

Distinguishing gene flow between malaria parasite populations

Author(s): Brown TS, Taylor AR, Arogbokun O, Buckee CO, Chang HHJournal: bioRxiv January 2021
Measuring gene flow between malaria parasite populations in different geographic locations can provide strategic information for malaria control interventions. Multiple…