Publications

Bacterial genomes in epidemiology–present and future.

Author(s): Croucher NJ, Harris SR, Grad YH, Hanage WP|Journal: Philos Trans R Soc Lond B Biol Sci|PMID: 23382424| February 2013

Sequence data are well established in the reconstruction of the phylogenetic and demographic scenarios that have given rise to outbreaks…

Comparative genomics of recent Shiga toxin-producing Escherichia coli O104:H4: short-term evolution of an emerging pathogen.

Author(s): Grad YH, Godfrey P, Cerquiera GC, Mariani-Kurkdjian P, Gouali M, Bingen E, Shea TP, Haas BJ, Griggs A, Young S, Zeng Q, Lipsitch M, Waldor MK, Weill FX, Wortman JR, Hanage WP|Journal: MBio|PMID: 23341549| January 2013

The large outbreak of diarrhea and hemolytic uremic syndrome (HUS) caused by Shiga toxin-producing Escherichia coli O104:H4 in Europe from…

Reply to Guy et al.: Support for a bottleneck in the 2011 Escherichia coli O104:H4 outbreak in Germany.

Author(s): Grad YH, Lipsitch M, Griggs AD, Haas BJ, Shea TP, McCowan C, Montmayeur A, FitzGerald M, Wortman JR, Krogfelt KA, Bingen E, Weill FX, Tietze E, Flieger A, Lander ES, Nusbaum C, Birren BW, Hung DT, Hanage WP|Journal: Proc Natl Acad Sci U S A|PMID: 23479789| December 2012

Cholera modeling: challenges to quantitative analysis and predicting the impact of interventions.

Author(s): Grad YH, Miller JC, Lipsitch M|Journal: Epidemiology|PMID: 22659546| July 2012

Several mathematical models of epidemic cholera have recently been proposed in response to outbreaks in Zimbabwe and Haiti. These models…

Genomic epidemiology of the Escherichia coli O104:H4 outbreaks in Europe, 2011.

Author(s): Grad YH, Lipsitch M, Feldgarden M, Arachchi HM, Cerqueira GC, FitzGerald M, Godfrey P, Haas BJ, Murphy CI, Russ C, Sykes S, Walker BJ, Wortman JR, Young S, Zeng Q, Abouelleil A, Bochicchio J, Chauvin S, Desmet T, Gujja S, McCowan C, Montmayeur A, Steelman S, Frimodt-Møller J, Petersen AM, Struve C, Krogfelt KA, Bingen E, Weill FX, Lander ES, Nusbaum C, Birren BW, Hung DT, Hanage WP|Journal: Proc Natl Acad Sci U S A|PMID: 22315421| February 2012

The degree to which molecular epidemiology reveals information about the sources and transmission patterns of an outbreak depends on the…

Secular trends in Helicobacter pylori seroprevalence in adults in the United States: evidence for sustained race/ethnic disparities.

Author(s): Grad YH, Lipsitch M, Aiello AE|Journal: Am J Epidemiol|PMID: 22085628| January 2012

Helicobacter pylori seroprevalence levels in US adults participating in the continuous National Health and Nutrition Examination Survey (1999-2000) increased with…